Model weights
Download the reference models we serve.
Each row is the current published build of one reference: the archive, the commit that produced it, its size, the SHA-256 of the bytes you will receive, the two licences that build ships under, and the reference atlas report describing what it was trained on. What each model was built from is tabulated on the methods page.
| Reference | Weights | Report | Build | Size | SHA-256 | Weights licence | Metadata licence |
|---|---|---|---|---|---|---|---|
| Human immune | Download | Download | v1 · not yet published | not yet published | not yet published | not yet published | not yet published |
| Human cortex | Download | Download | v1 · not yet published | not yet published | not yet published | not yet published | not yet published |
| Human eye | Download | Download | v1 · not yet published | not yet published | not yet published | not yet published | not yet published |
| Human lung | Download | Download | v1 · not yet published | not yet published | not yet published | not yet published | not yet published |
| Human gut | Download | Download | v1 · not yet published | not yet published | not yet published | not yet published | not yet published |
| Human breast | Download | Download | v1 · not yet published | not yet published | not yet published | not yet published | not yet published |
| Human heart | Download | Download | v1 · not yet published | not yet published | not yet published | not yet published | not yet published |
| Human liver | Download | Download | v1 · not yet published | not yet published | not yet published | not yet published | not yet published |
| Human kidney | Download | Download | v1 · not yet published | not yet published | not yet published | not yet published | not yet published |
| Human skin | Download | Download | v1 · not yet published | not yet published | not yet published | not yet published | not yet published |
| Human adipose | Download | Download | v1 · not yet published | not yet published | not yet published | not yet published | not yet published |
| Human muscle | Download | Download | v1 · not yet published | not yet published | not yet published | not yet published | not yet published |
| Human female reproductive | Download | Download | v1 · not yet published | not yet published | not yet published | not yet published | not yet published |
| Mouse brain | Download | Download | v1 · not yet published | not yet published | not yet published | not yet published | not yet published |
Commercial use of the weights requires a separate licence: contact us.
Batch labels are published as opaque indices. Model behaviour is unchanged. The full
explanation ships as NOTICE.txt inside the archive.
Weights alone reproduce the cell type calls. They do not reproduce the OOD score or the secondary label columns, which are computed against reference artifacts rather than the model: the aggregate posterior and the reference latent space.
Licensing
Each archive carries two licences because it holds two kinds of content: the model
parameters, our own work, under a licence that permits research and other non-commercial
use, named in the row; and the metadata alongside them (label registry, manifest, dataset
list), derived from the training data and passed on under the training data's own terms,
with attribution. Both are named in the row, and the archive's NOTICE.txt
states which files fall under which.
The training data is CZI CELLxGENE Census, CC BY 4.0, attributed per study
on the attribution page and in each build's manifest.
We do not redistribute reference expression data. See terms.